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A comprehensive and easy-to-use multi-domain multi-task medical imaging meta-dataset

2024/04/24 by Stefano Woerner, Woerner, Stefano, Arthur Jaques +3 · 2 citations
Medicine · #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #Machine Learning (cs.LG) #Radiomics and Machine Learning in Medical Imaging

paper · pdf · doi:10.48550/arxiv.2404.16000

openalex publication_date 2024/04/24 · openalex created_date 2024/04/26 · openalex updated_date 2026/07/28

Abstract

While the field of medical image analysis has undergone a transformative shift with the integration of machine learning techniques, the main challenge of these techniques is often the scarcity of large, diverse, and well-annotated datasets. Medical images vary in format, size, and other parameters and therefore require extensive preprocessing and standardization, for usage in machine learning. Addressing these challenges, we introduce the Medical Imaging Meta-Dataset (MedIMeta), a novel multi-domain, multi-task meta-dataset. MedIMeta contains 19 medical imaging datasets spanning 10 different domains and encompassing 54 distinct medical tasks, all of which are standardized to the same format and readily usable in PyTorch or other ML frameworks. We perform a technical validation of MedIMeta, demonstrating its utility through fully supervised and cross-domain few-shot learning baselines.

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