2014/12/02 by Ting Wang, Wang, Ting, Muruhan Rathinam +1 · 1 citation
Chemistry · Mathematics · Physics and Astronomy · #60H35 #65C99 (Primary) #92C42 #92C45 (Secondary) #Advanced Thermodynamics and Statistical Mechanics #Diffusion Coefficients in Liquids #FOS: Mathematics #Numerical Analysis (math.NA) #Statistical Methods and Bayesian Inference
paper · pdf · doi:10.48550/arxiv.1412.1005
openalex publication_date 2014/12/02 · openalex created_date 2016/06/24 · openalex updated_date 2026/07/28
Most common Monte Carlo methods for sensitivity analysis of stochastic reaction networks are the finite difference (FD), the Girsanov transformation (GT) and the regularized pathwise derivative (RPD) methods. It has been numerically observed in the literature, that the biased FD and RPD methods tend to have lower variance than the unbiased GT method and that centering the GT method (CGT) reduces its variance. We provide a theoretical justification for these observations in terms of system size asymptotic analysis under what is known as the classical scaling. Our analysis applies to GT, CGT and FD, and shows that the standard deviations of their estimators when normalized by the actual sensitivity, scale as O(N1/2), O(1) and O(N-1/2) respectively, as system size N → ∞. In the case of the FD methods, the N → ∞ asymptotics are obtained keeping the finite difference perturbation h fixed. Our numerical examples verify that our order estimates are sharp and that the variance of the RPD method scales similarly to the FD methods. We combine our large N asymptotics with previously known small h asymptotics to obtain the best choice of h in terms of N, and estimate the number Ns of simulations required to achieve a prescribed relative L2 error δ. This shows that Ns depends on δ and N as δ-2 - (γ2)/(γ1) N-1, δ-2 and N δ-2, for FD, CGT and GT respectively. Here γ1 >0, γ2>0 depend on the type of FD method used.