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Representation Disentanglement for Multi-modal brain MR Analysis

2021/02/23 by Jiahong Ouyang, Ehsan Adeli, Ouyang, Jiahong +7 · 1 citation
Computer Science · Engineering · Medicine · #Advanced Image Processing Techniques #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #Image Processing Techniques and Applications #Radiomics and Machine Learning in Medical Imaging

paper · pdf · doi:10.48550/arxiv.2102.11456

openalex publication_date 2021/02/23 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/28

Abstract

Multi-modal MRIs are widely used in neuroimaging applications since different MR sequences provide complementary information about brain structures. Recent works have suggested that multi-modal deep learning analysis can benefit from explicitly disentangling anatomical (shape) and modality (appearance) information into separate image presentations. In this work, we challenge mainstream strategies by showing that they do not naturally lead to representation disentanglement both in theory and in practice. To address this issue, we propose a margin loss that regularizes the similarity in relationships of the representations across subjects and modalities. To enable robust training, we further use a conditional convolution to design a single model for encoding images of all modalities. Lastly, we propose a fusion function to combine the disentangled anatomical representations as a set of modality-invariant features for downstream tasks. We evaluate the proposed method on three multi-modal neuroimaging datasets. Experiments show that our proposed method can achieve superior disentangled representations compared to existing disentanglement strategies. Results also indicate that the fused anatomical representation has potential in the downstream task of zero-dose PET reconstruction and brain tumor segmentation. The code is available at \urlhttps://github.com/ouyangjiahong/representation-disentanglement.

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