2021/05/06 by Endre Somogyi, Somogyi, Endre T., Jeffery Coulter +7
Biochemistry, Genetics and Molecular Biology · Decision Sciences · #FOS: Biological sciences #Microtubule and mitosis dynamics #Protein Structure and Dynamics #Scientific Computing and Data Management #Subcellular Processes (q-bio.SC)
paper · pdf · doi:10.48550/arxiv.2105.02476
openalex publication_date 2021/05/06 · openalex created_date 2021/05/10 · openalex updated_date 2026/07/28
Modeling and simulation (M&S) has revolutionized the way modern engineered products are designed, tested and evaluated. Yet modeling and simulation is much less frequently applied in the study of natural biological and active matter systems. Two of the greatest challenges in applying M&S approaches to natural biological systems are (1) difficulty in specifying a model, and developing a simulation from it, and (2) tuning and optimizing parameters. Here we address the first challenge directly, and develop a software library that can lead to progress in the second.