2025/04/28 by Jinglin He, He, Jinglin, Yunqi Guo +14 · 2 citations
Biochemistry, Genetics and Molecular Biology · Computer Science · Medicine · #Artificial Intelligence (cs.AI) #Biomedical Text Mining and Ontologies #FOS: Computer and information sciences #Information Retrieval (cs.IR) #Topic Modeling #Traditional Chinese Medicine Studies
paper · pdf · doi:10.48550/arxiv.2504.20118
openalex publication_date 2025/04/28 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/28
Traditional Chinese Medicine (TCM) represents a rich repository of ancient medical knowledge that continues to play an important role in modern healthcare. Due to the complexity and breadth of the TCM literature, the integration of AI technologies is critical for its modernization and broader accessibility. However, this integration poses considerable challenges, including the interpretation of obscure classical Chinese texts and the modeling of intricate semantic relationships among TCM concepts. In this paper, we develop OpenTCM, an LLM-based system that combines a domain-specific TCM knowledge graph and Graph-based Retrieval-Augmented Generation (GraphRAG). First, we extract more than 3.73 million classical Chinese characters from 68 gynecological books in the Chinese Medical Classics Database, with the help of TCM and gynecology experts. Second, we construct a comprehensive multi-relational knowledge graph comprising more than 48,000 entities and 152,000 interrelationships, using customized prompts and Chinese-oriented LLMs such as DeepSeek and Kimi to ensure high-fidelity semantic understanding. Last, we empower OpenTCM with GraphRAG, enabling high-fidelity ingredient knowledge retrieval and diagnostic question-answering without model fine-tuning. Experimental evaluations demonstrate that OpenTCM achieves mean expert scores (MES) of 4.378 in ingredient information retrieval and 4.045 in diagnostic question-answering tasks, outperforming state-of-the-art solutions in real-world TCM use cases.