2019/12/14 by Alexandru Iosif, Iosif, Alexandru, Hamid Rahkooy +1 · 1 citation
Biochemistry, Genetics and Molecular Biology · Chemistry · Computer Science · #Analytical Chemistry and Chromatography #Computational Drug Discovery Methods #FOS: Biological sciences #FOS: Computer and information sciences #Gene Regulatory Network Analysis #Molecular Networks (q-bio.MN) #Symbolic Computation (cs.SC) #cs.SC #q-bio.MN
paper · pdf · doi:10.48550/arxiv.1912.06896
arxiv created 2019/12/14 · openalex publication_date 2019/12/14 · arxiv updated 2019/12/17 · openalex created_date 2019/12/26 · openalex updated_date 2026/07/28
We analyze the Conradi-Kahle Algorithm for detecting binomiality. We present experiments using two implementations of the algorithm in Macaulay2 and Maple on biological models and assess the performance of the algorithm on these models. We compare the two implementations with each other and with Gröbner bases computations up to their performance on these biological models.