Concentrations of environmental DNA (eDNA) reflect spawning salmon abundance at fine spatial and temporal scales

2018/02/06 by Michael D. Tillotson, Ryan P. Kelly, Jeffrey J. Duda +4 · 39 citations
Environmental Science · Biochemistry, Genetics and Molecular Biology · #Environmental DNA in Biodiversity Studies #Microbial Community Ecology and Physiology #Identification and Quantification in Food

paper · doi:10.1016/j.biocon.2018.01.030

Citations

• Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

Cited by

• Quantitative insights into the spatio‐temporal variation of Atlantic salmon (<scp><i>Salmo salar</i></scp>) biomass in a river catchment using <scp>eDNA</scp> metabarcoding
• A systematic review evaluating the performance of eDNA methods relative to conventional methods for biodiversity monitoring
• The Genomics Revolution in Nonmodel Species: Predictions vs. Reality for Salmonids
• A Framework to Unify the Relationship Between Numerical Abundance, Biomass, and Environmental <scp>DNA</scp>
• Utilizing aquatic environmental DNA to address global biodiversity targets
• Arctic char occurrence and abundance using environmental DNA
• Live and dead fish shed different amounts of intact cells: Implications for advancing environmental DNA methodologies
• Non-target detections change the interpretation of environmental DNA communities
• eDNAjoint: An R package for interpreting paired or semi‐paired environmental <scp>DNA</scp> and traditional survey data in a Bayesian framework
• Filter pore size influences taxonomic composition of retained eDNA from seawater samples—evidence from shotgun sequencing
• Trends in Aquatic Environmental <scp>DNA</scp> Research in Alaska
• Fish from the sky: Airborne eDNA tracks aquatic life
• Spatiotemporal distribution and habitat suitability of the anadromous fish Coilia nasus revealed by environmental DNA and MaxEnt modelling
• Applications of environmental DNA (eDNA) in ecology and conservation: opportunities, challenges and prospects
• The effect of tides on nearshore environmental DNA. [europepmc]
• Understanding PCR Processes to Draw Meaningful Conclusions from Environmental DNA Studies. [europepmc]
• Monitoring spawning migrations of potamodromous fish species via eDNA. [europepmc]
• Predicting the fate of eDNA in the environment and implications for studying biodiversity. [europepmc]
• Use of environmental DNA (eDNA) in streams to detect feral swine ( Sus scrofa) . [europepmc]
• Spatial and temporal patterns of environmental DNA detection to inform sampling protocols in lentic and lotic systems. [europepmc]
• No evidence that crayfish carcasses produce detectable environmental DNA (eDNA) in a stream enclosure experiment. [europepmc]
• Sedimentary DNA tracks decadal-centennial changes in fish abundance. [europepmc]
• Environmental DNA metabarcoding of cow dung reveals taxonomic and functional diversity of invertebrate assemblages. [europepmc]
• Composition and distribution of fish environmental DNA in an Adirondack watershed. [europepmc]
• Meta-analysis shows that environmental DNA outperforms traditional surveys, but warrants better reporting standards. [europepmc]
• Environmental DNA detection of an invasive ant species (Linepithema humile) from soil samples. [europepmc]
• Development of a Quantitative PCR Assay for Four Salmon Species Inhabiting the Yangyangnamdae River Using Environmental DNA. [europepmc]
• eDNA captures depth partitioning in a kelp forest ecosystem. [europepmc]
• Environmental DNA provides quantitative estimates of Pacific hake abundance and distribution in the open ocean. [europepmc]
• Environmental nucleic acids: A field-based comparison for monitoring freshwater habitats using eDNA and eRNA. [europepmc]
• Environmental DNA detects Spawning Habitat of an ephemeral migrant fish (Anadromous Rainbow Smelt: Osmerus mordax). [europepmc]
• A manager's guide to using eDNA metabarcoding in marine ecosystems. [europepmc]
• Using eDNA sampling for species-specific fish detection in tropical oceanic samples: limitations and recommendations for future use. [europepmc]
• A comparison of biomonitoring methodologies for surf zone fish communities. [europepmc]
• Drop it all: extraction-free detection of targeted marine species through optimized direct droplet digital PCR. [europepmc]
• Environmental DNA concentrations vary greatly across productive and degradative conditions, with implications for the precision of population estimates. [europepmc]
• Environmental DNA Insights into the Spatial Status of Fish Diversity in the Mainstem of the Jialing River. [europepmc]
• Application of Environmental DNA for Assessing the Distribution and Biomass of Brachymystax lenok Tsinlingensis in the Zhouzhi Heihe River. [europepmc]
• Passive air sampling detects environmental DNA transfer from water into air. [europepmc]