2023/06/25 by Anna L. D. Latour, Latour, Anna L. D., Arunabha Sen +3 · 2 citations
Biochemistry, Genetics and Molecular Biology · Computer Science · #Advanced biosensing and bioanalysis techniques #Algorithms and Data Compression #FOS: Computer and information sciences #Logic in Computer Science (cs.LO) #Social and Information Networks (cs.SI) #Software Testing and Debugging Techniques
paper · pdf · doi:10.48550/arxiv.2306.15693
openalex publication_date 2023/06/25 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/28
An important problem in network science is finding an optimal placement of sensors in nodes in order to uniquely detect failures in the network. This problem can be modelled as an identifying code set (ICS) problem, introduced by Karpovsky et al. in 1998. The ICS problem aims to find a cover of a set S, s.t. the elements in the cover define a unique signature for each of the elements of S, and to minimise the cover's cardinality. In this work, we study a generalised identifying code set (GICS) problem, where a unique signature must be found for each subset of S that has a cardinality of at most k (instead of just each element of S). The concept of an independent support of a Boolean formula was introduced by Chakraborty et al. in 2014 to speed up propositional model counting, by identifying a subset of variables whose truth assignments uniquely define those of the other variables. In this work, we introduce an extended version of independent support, grouped independent support (GIS), and show how to reduce the GICS problem to the GIS problem. We then propose a new solving method for finding a GICS, based on finding a GIS. We show that the prior state-of-the-art approaches yield integer-linear programming (ILP) models whose sizes grow exponentially with the problem size and k, while our GIS encoding only grows polynomially with the problem size and k. While the ILP approach can solve the GICS problem on networks of at most 494 nodes, the GIS-based method can handle networks of up to 21363 nodes; a ∼ 40× improvement. The GIS-based method shows up to a 520× improvement on the ILP-based method in terms of median solving time. For the majority of the instances that can be encoded and solved by both methods, the cardinality of the solution returned by the GIS-based method is less than 10% larger than the cardinality of the solution found by the ILP method.