Mass spectrometry analysis using MALDIquant

2016/07/11 by Gibb, Sebastian, Strimmer, Korbinian
#Applications (stat.AP) #FOS: Biological sciences #FOS: Computer and information sciences #Quantitative Methods (q-bio.QM)

paper · doi:10.48550/arxiv.1607.03180

Abstract

MALDIquant and associated R packages provide a versatile and completely free open-source platform for analyzing 2D mass spectrometry data as generated for instance by MALDI and SELDI instruments. We first describe the various methods and algorithms available in MALDIquant . Subsequently, we illustrate a typical analysis workflow using MALDIquant by investigating an experimental cancer data set, starting from raw mass spectrometry measurements and ending at multivariate classification.

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