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Efficient CRISPR-Cas genome editing in brown algae

2025/12/30 by Cláudia Martinho, Masakazu Hoshino, Morgane Raphalen +5 · 2 voices · 2 citations
Biochemistry, Genetics and Molecular Biology · Energy · #CRISPR and Genetic Engineering #Algal biology and biofuel production #Photosynthetic Processes and Mechanisms

paper · doi:10.1016/j.crmeth.2025.101273

Abstract

Brown algae represent the third most complex lineage to have independently evolved multicellularity, distinct from plants and animals. Yet, functional studies of their development and evolution have been limited by the absence of efficient genome editing tools. Here, we present a robust, high-efficiency, and transgene-free CRISPR-based genome editing platform applicable across four ecologically and biotechnologically important brown algal species. Using Ectocarpus as a model, we optimized a polyethylene glycol (PEG)-mediated ribonucleoprotein (RNP) delivery system that achieves reproducible editing across multiple loci without cloning or specialized equipment. As proof of concept, we recreated the hallmark imm mutant phenotype by precisely editing the IMMEDIATE UPRIGHT (IMM) locus. APT/2-fluoroadenine (2-FA) selection further enhanced specificity with minimal false positives. The method was easily transferable to other species, including kelps. This platform now enables functional genomics in brown algae, providing powerful tools for investigating development, life cycle regulation, and the independent evolution of complex multicellularity.

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