2013/05/16 by Jennifer D. Warrender, Warrender, Jennifer D., Phillip Lord +1
Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · Computer Science · #Biomedical Text Mining and Ontologies #Chromosomal and Genetic Variations #Computational Engineering #FOS: Biological sciences #FOS: Computer and information sciences #Finance #Genetic Syndromes and Imprinting #Genomics (q-bio.GN) #Genomics and Rare Diseases #Semantic Web and Ontologies #and Science (cs.CE)
paper · pdf · doi:10.48550/arxiv.1305.3758
openalex publication_date 2013/05/16 · openalex created_date 2022/10/01 · openalex updated_date 2026/07/28
The karyotype ontology describes the human chromosome complement as\ndetermined cytogenetically, and is designed as an initial step toward the goal\nof replacing the current system which is based on semantically meaningful\nstrings. This ontology uses a novel, semi-programmatic methodology based around\nthe tawny library to construct many classes rapidly. Here, we describe our use\ncase, methodology and the event-based approach that we use to represent\nkaryotypes.\n The ontology is available at http://www.purl.org/ontolink/karyotype/. The\nclojure code is available at http://code.google.com/p/karyotype-clj/.\n