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Online and Offline Algorithms for Counting Distinct Closed Factors via Sliding Suffix Trees

2024/09/29 by Takuya Mieno, Shun Takahashi, Mieno, Takuya +5 · 1 citation
Computer Science · #Algorithms and Data Compression #Data Management and Algorithms #Data Structures and Algorithms (cs.DS) #FOS: Computer and information sciences #Text and Document Classification Technologies

paper · pdf · doi:10.48550/arxiv.2409.19576

openalex publication_date 2024/09/29 · openalex created_date 2024/10/28 · openalex updated_date 2026/07/28

Abstract

A string is said to be closed if its length is one, or if it has a non-empty factor that occurs both as a prefix and as a suffix of the string, but does not occur elsewhere. The notion of closed words was introduced by [Fici, WORDS 2011]. Recently, the maximum number of distinct closed factors occurring in a string was investigated by [Parshina and Puzynina, Theor. Comput. Sci. 2024], and an asymptotic tight bound was proved. In this paper, we propose two algorithms to count the distinct closed factors in a string T of length n over an alphabet of size σ. The first algorithm runs in O(n log σ) time using O(n) space for string T given in an online manner. The second algorithm runs in O(n) time using O(n) space for string T given in an offline manner. Both algorithms utilize suffix trees for sliding windows.

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