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OctopusNet: A Deep Learning Segmentation Network for Multi-modal Medical Images

2019/06/05 by Yu Chen, Jiawei Chen, Chen, Yu +7
Computer Science · Engineering · #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #FOS: Electrical engineering #Image and Video Processing (eess.IV) #cs.CV #eess.IV #electronic engineering #information engineering

paper · pdf · doi:10.48550/arxiv.1906.02031

arxiv created 2019/08/22 · arxiv updated 2019/08/23

Abstract

Deep learning models, such as the fully convolutional network (FCN), have been widely used in 3D biomedical segmentation and achieved state-of-the-art performance. Multiple modalities are often used for disease diagnosis and quantification. Two approaches are widely used in the literature to fuse multiple modalities in the segmentation networks: early-fusion (which stacks multiple modalities as different input channels) and late-fusion (which fuses the segmentation results from different modalities at the very end). These fusion methods easily suffer from the cross-modal interference caused by the input modalities which have wide variations. To address the problem, we propose a novel deep learning architecture, namely OctopusNet, to better leverage and fuse the information contained in multi-modalities. The proposed framework employs a separate encoder for each modality for feature extraction and exploits a hyper-fusion decoder to fuse the extracted features while avoiding feature explosion. We evaluate the proposed OctopusNet on two publicly available datasets, i.e. ISLES-2018 and MRBrainS-2013. The experimental results show that our framework outperforms the commonly-used feature fusion approaches and yields the state-of-the-art segmentation accuracy.

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