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Extractive Summarization of EHR Discharge Notes

2018/10/26 by Emily Alsentzer, Alsentzer, Emily, Anne Kim +1 · 1 citation
Biochemistry, Genetics and Molecular Biology · Computer Science · #Biomedical Text Mining and Ontologies #Computation and Language (cs.CL) #FOS: Computer and information sciences #Information Retrieval (cs.IR) #Machine Learning (cs.LG) #Machine Learning (stat.ML) #Machine Learning in Healthcare #Topic Modeling

paper · pdf · doi:10.48550/arxiv.1810.12085

openalex publication_date 2018/10/26 · openalex created_date 2025/10/10 · openalex updated_date 2026/07/28

Abstract

Patient summarization is essential for clinicians to provide coordinated care and practice effective communication. Automated summarization has the potential to save time, standardize notes, aid clinical decision making, and reduce medical errors. Here we provide an upper bound on extractive summarization of discharge notes and develop an LSTM model to sequentially label topics of history of present illness notes. We achieve an F1 score of 0.876, which indicates that this model can be employed to create a dataset for evaluation of extractive summarization methods.

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