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Predicting Brain Morphogenesis via Physics-Transfer Learning

2025/08/22 by Yingjie Zhao, Yicheng Song, Zhao, Yingjie +5
Biochemistry, Genetics and Molecular Biology · Neuroscience · #Cell Image Analysis Techniques #FOS: Biological sciences #FOS: Computer and information sciences #FOS: Physical sciences #Functional Brain Connectivity Studies #Machine Learning (cs.LG) #Neurons and Cognition (q-bio.NC) #Pattern Formation and Solitons (nlin.PS)

paper · pdf · doi:10.48550/arxiv.2509.05305

openalex publication_date 2025/08/22 · openalex created_date 2025/10/11 · openalex updated_date 2026/07/28

Abstract

Brain morphology is shaped by genetic and mechanical factors and is linked to biological development and diseases. Its fractal-like features, regional anisotropy, and complex curvature distributions hinder quantitative insights in medical inspections. Recognizing that the underlying elastic instability and bifurcation share the same physics as simple geometries such as spheres and ellipses, we developed a physics-transfer learning framework to address the geometrical complexity. To overcome the challenge of data scarcity, we constructed a digital library of high-fidelity continuum mechanics modeling that both describes and predicts the developmental processes of brain growth and disease. The physics of nonlinear elasticity from simple geometries is embedded into a neural network and applied to brain models. This physics-transfer approach demonstrates remarkable performance in feature characterization and morphogenesis prediction, highlighting the pivotal role of localized deformation in dominating over the background geometry. The data-driven framework also provides a library of reduced-dimensional evolutionary representations that capture the essential physics of the highly folded cerebral cortex. Validation through medical images and domain expertise underscores the deployment of digital-twin technology in comprehending the morphological complexity of the brain.

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