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Approximating Partial Likelihood Estimators via Optimal Subsampling

2022/10/10 by Haixiang Zhang, Zhang, Haixiang, Lulu Zuo +5
Mathematics · #Computation (stat.CO) #FOS: Computer and information sciences #Markov Chains and Monte Carlo Methods #Methodology (stat.ME) #Statistical Methods and Bayesian Inference #Statistical Methods and Inference

paper · pdf · doi:10.48550/arxiv.2210.04581

openalex publication_date 2022/10/10 · openalex created_date 2025/10/10 · openalex updated_date 2026/08/01

Abstract

With the growing availability of large-scale biomedical data, it is often time-consuming or infeasible to directly perform traditional statistical analysis with relatively limited computing resources at hand. We propose a fast subsampling method to effectively approximate the full data maximum partial likelihood estimator in Cox's model, which largely reduces the computational burden when analyzing massive survival data. We establish consistency and asymptotic normality of a general subsample-based estimator. The optimal subsampling probabilities with explicit expressions are determined via minimizing the trace of the asymptotic variance-covariance matrix for a linearly transformed parameter estimator. We propose a two-step subsampling algorithm for practical implementation, which has a significant reduction in computing time compared to the full data method. The asymptotic properties of the resulting two-step subsample-based estimator is also established. Extensive numerical experiments and a real-world example are provided to assess our subsampling strategy.

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