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TextRay: Mining Clinical Reports to Gain a Broad Understanding of Chest X-rays

2018/06/06 by Jonathan Laserson, Laserson, Jonathan, Christine Dan Lantsman +15
Computer Science · Mathematics · #Computer Vision and Pattern Recognition (cs.CV) #FOS: Computer and information sciences #Machine Learning (stat.ML) #cs.CV #stat.ML

paper · pdf · doi:10.48550/arxiv.1806.02121

Accepted to MICCAI 2018

arxiv created 2018/06/06 · arxiv updated 2018/06/07

Abstract

The chest X-ray (CXR) is by far the most commonly performed radiological examination for screening and diagnosis of many cardiac and pulmonary diseases. There is an immense world-wide shortage of physicians capable of providing rapid and accurate interpretation of this study. A radiologist-driven analysis of over two million CXR reports generated an ontology including the 40 most prevalent pathologies on CXR. By manually tagging a relatively small set of sentences, we were able to construct a training set of 959k studies. A deep learning model was trained to predict the findings given the patient frontal and lateral scans. For 12 of the findings we compare the model performance against a team of radiologists and show that in most cases the radiologists agree on average more with the algorithm than with each other.

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